TY - BOOK AU - ED - SpringerLink (Online service) TI - Coarse-Grained Modelling of DNA and DNA Self-Assembly T2 - Springer Theses, Recognizing Outstanding Ph.D. Research, SN - 9783642305177 AV - QH505 U1 - 571.4 23 PY - 2012/// CY - Berlin, Heidelberg PB - Springer Berlin Heidelberg, Imprint: Springer KW - Physics KW - Polymers KW - Nanotechnology KW - Biophysics and Biological Physics KW - Polymer Sciences KW - Statistical Physics, Dynamical Systems and Complexity KW - Soft and Granular Matter, Complex Fluids and Microfluidics N1 - A Novel DNA Model -- Methods -- Finite Size Effects -- Structural and Mechanical Properties of Model DNA -- Thermodynamic Properties of Model DNA -- Modelling DNA Tweezers -- Modelling a DNA Walker; ZDB-2-PHA N2 - This thesis presents a novel coarse-grained model of DNA, in which bases are represented as rigid nucleotides. The model is shown to quantitatively reproduce many phenomena, including elastic properties of the double-stranded state, hairpin formation in single strands and hybridization of pairs of strands to form duplexes, the first time such a wide range of properties has been captured by a coarse-grained model. The scope and potential of the model is demonstrated by simulating DNA tweezers, an iconic nanodevice, and a two-footed DNA walker the first time that coarse-grained modelling has been applied to dynamic DNA nanotechnology UR - http://dx.doi.org/10.1007/978-3-642-30517-7 ER -